BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027A03LP1|AL428642
(862 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1624 1701 0.0
>3x_Contig1624
Length = 12551
Score = 1701 bits (858), Expect = 0.0
Identities = 861/862 (99%)
Strand = Plus / Plus
Query: 1 caattgatggatctcgtatactggaacatggtaagacacgaaaccgtttctggaatagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938 caattgatggatctcgtatactggaacatggtaagacacgaaaccgtttctggaatagta 997
Query: 61 ctcatctacttcactgtaaagatcaatagtcatatacttcaagaacggatcatcgcttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 998 ctcatctacttcactgtaaagatcaatagtcatatacttcaagaacggatcatcgcttga 1057
Query: 121 ttctgataaagaatcgtacatatggtttaactgatcaatcattttcttggcatatccacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1058 ttctgataaagaatcgtacatatggtttaactgatcaatcattttcttggcatatccacg 1117
Query: 181 gccacgatggtgtttcagggtgaaaacacccccgacacaagcggtgagcaccggagttat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1118 gccacgatggtgtttcagggtgaaaacacccccgacacaagcggtgagcaccggagttat 1177
Query: 241 ctcctcactaccagggaccataacccagccgaccctgttcattgtttcacaacttgccac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1178 ctcctcactaccagggaccataacccagccgaccctgttcattgtttcacaacttgccac 1237
Query: 301 tatctgagacgtctttgatgtctcaggaagagttaaatccttcaacacaaaatgcttgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1238 tatctgagacgtctttgatgtctcaggaagagttaaatccttcaacacaaaatgcttgat 1297
Query: 361 acctaaatgtttagcattgtcctcgaacctatcaatatgatcaccactcttatgtaactg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1298 acctaaatgtttagcattgtcctcgaacctatcaatatgatcaccactcttatgtaactg 1357
Query: 421 ccctagttcactttgacccaaaatatgctctctgtcagcgtactcttcacgacttagata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1358 ccctagttcactttgacccaaaatatgctctctgtcagcgtactcttcacgacttagata 1417
Query: 481 ttcaccactccatgtggaaccgttctgcaaatgagttaacctaatcacttctggatcgtc 540
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1418 ttcaccactccatgtggaaccgttctgcaaatgagtaaacctaatcacttctggatcgtc 1477
Query: 541 aacagcctcaaacttgacagatagagtcatccctgttttattaattttatgatttccctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1478 aacagcctcaaacttgacagatagagtcatccctgttttattaattttatgatttccctt 1537
Query: 601 agccatacgagtttcaacatatctaagagaagaccgactgaaatgtactaatgaagattt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1538 agccatacgagtttcaacatatctaagagaagaccgactgaaatgtactaatgaagattt 1597
Query: 661 atatttgccctttatatatacgtttaactggaaaaacgagaaatactatttcctatcgca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1598 atatttgccctttatatatacgtttaactggaaaaacgagaaatactatttcctatcgca 1657
Query: 721 tcgaattcctttattctaaatttaattctgcaaacgttaattacatgcgactgcaataaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1658 tcgaattcctttattctaaatttaattctgcaaacgttaattacatgcgactgcaataaa 1717
Query: 781 ataaataaaataaacccttatacggataacttaaagaagattttctagtcagccttacct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1718 ataaataaaataaacccttatacggataacttaaagaagattttctagtcagccttacct 1777
Query: 841 tatagaaactagaagtttgctt 862
||||||||||||||||||||||
Sbjct: 1778 tatagaaactagaagtttgctt 1799
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6165
Number of Sequences: 1807
Number of extensions: 6165
Number of successful extensions: 39
Number of sequences better than 1.0e-20: 1
length of query: 862
length of database: 10,358,551
effective HSP length: 16
effective length of query: 846
effective length of database: 10,329,639
effective search space: 8738874594
effective search space used: 8738874594
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)